computational
modeling in biology

Schriftgröße »A . A+ . A++ .

Florian Blöchl

Alumni


Research

 

Publications

  • Blöchl F, Wittmann DM, and Theis FJ: Effective parameters determining the information flow in hierarchical biological systems, Bulletin of Mathematical Biology, 73(4):706-725, 2011. pdf
  • Baskaran T, Blöchl F, Brück T, and Theis FJ: The Heckscher-Ohlin Model and the Network Structure of International Trade. International Review of Finance and Economics, 20(2):135-145, 2011. pdf
  • Blöchl F, Theis FJ, Vega-Redondo F, and Fisher E: Vertex Centralities in Input-Output Networks Reveal the Structure of Modern Economies, Physical Review E, 83(4):046127, 2011. pdf
  • Kowarsch A, Blöchl F (equal contributor), Bohl S, Saile M, Gretz N, Klingmüller U, and Theis FJ: Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation. BMC Bioinformatics, 11:585, 2010. pdf
  • Hartsperger ML, Blöchl F (equal contributor), Stümpflen V, and Theis FJ. Structuring biological data using fuzzy clustering of k-partite graphs.  BMC Bioinformatics, 11:522, 2010. pdf
  • Blöchl F, Theis FJ, Vega-Redondo F, and Fisher E: Which sectors of a modern economy are most central?, CESifo Working Paper Series No. 3175, 2010. link
  • Blöchl F, Kowarsch A, and Theis FJ. Second-order source separation based on prior knowledge realized in a graph model, In Proc. LVA/ICA 2010, volume 6365 of LNCS, pages 434-441, St. Malo, France, 2010. Springer. pdf
  • Blöchl F, Hartsperger ML, Stümpflen V, and Theis FJ. Uncovering the structure of heterogeneous biological data: fuzzy graph partitioning in the k-partite setting, In Proc. GCB 2010, volume 173 of LNI, pages 31-40, Braunschweig, Germany, 2010. GI.
  • Ansorg M, Blöchl F, zu Castell W, Theis FJ and Wittmann DM. Gene regulation at the mid-hindbrain boundary: Study of a mathematical model in the stationary limit, Int J Biomath and Biostat, 1(1): 9-21, 2010.
  • Wittmann DM, Blöchl F, Trümbach D, Wurst W, Prakash N and Theis FJ. Spatial Analysis of Expression Patterns Predicts Genetic Interactions at the Mid-Hindbrain Boundary. PLoS Comput Biol 5:11, 2009. pdf
  • Blöchl F, Rascle A, Kastner J, Witzgall R, Lang EW, and Theis FJ. Are we to integrate previous information into microarray analyses? Interpretation of a Lmx1b-knockout experiment. In Recent Progress in Biomedical Signal Processing, Eds. Górriz JM, Lang EW, Ramírez J, Bentham Science Publishers, to appear. pdf
  • Lang EW, Schachtner R, Lutter D, Herold D, Kodewitzz A, Blöchl F, Theis FJ, Keck IR, Gorriz Saez JM, Gomez Vilda O, and Tome AM. Exploratory Matrix Factorization Techniques For Large Scale Biomedical Data Sets. In Recent Progress in Biomedical Signal Processing, Eds. Górriz JM, Lang EW, Ramírez J, Bentham Science Publishers, to appear.   
  • Blöchl F and Theis FJ. Estimating hidden influences in metabolic and gene regulatory networks, In Proc. ICA 2009, volume 5441 of LNCS, pages 387-394, Paraty, Brasil, 2009. Springer. pdf
  • Wittmann DM, Schmidl D, Blöchl F and Theis FJ. Reconstruction of graphs based on random walks. Journal of Theoretical Computer Science, 410, 2009. pdf
  • Wong P, Althammer S, Hildebrand A, Kirschner A, Pagel P, Geissler B, Smialowski P, Blöchl F, Oesterheld M, Schmidt T, Strack N, Theis F, Ruepp A, and Frishman D. An evolutionary and structural characterization of mammalian protein complex organization. BMC Genomics 2008, 9:629. pdf

 

Conference Contributions

  • Blöchl F, Theis FJ and Fisher E. What network analysis can tall us about car-scrap bonus: the linchpins of modern economies, DPG Spring Meeting 2010, Regensburg 2010 
  • Blöchl F, Hartsperger ML, Stümpflen V and Theis FJ. Structuring k-partite networks by decomposition into overlapping communities, DPG Spring Meeting 2010, Regensburg 2010
  • Theis FJ, Blöchl F and Brockmann D. Properties of transport networks need to be invariant under coarse-graining, DPG Spring Meeting 2010, Regensburg 2010 
  • Wittmann DM, Theis FJ and Blöchl F: Effective parameters determining the information flow in hierarchical biological system. In Proc. ICSB 2010, Edinburgh 2010.
  • Blöchl F , Fisher E and Theis FJ. Which Sectors of a Modern Economy are Most Central, 12th Southwest Economic Theory Conference, Lake Arrowhead, 2010
  • Blöchl F, Wittmann DM and Theis FJ. Effective parameters determining the information flow in hierarchical biological systems, Workshop Data 2 Dynamics 2009, Freising 
  • Wittmann DM, Blöchl F, Trümbach D, Wurst W, Prahash N and Theis FJ. Modeling maintenance of the mid-hindbrain boundary. In Proc. ICSB 2008, Gothenburg 2008
  • Blöchl F, Riehle K, Dietmann S, Theis FJ. Generative models and statistics of hypergraphs in biology, Status Seminar of the Helmholtz Alliance on Systems Biology, Postsdam, 2008
  • Wittmann DM, Blöchl F, Trümbach D, Wurst W, Prahash N and Theis FJ. Modeling the Mid-Hindbrain Boundary, Spring School 2008 on Systems Biology, Kloster Seeon
  • Blöchl F. Analysis of a LMX1B knockout experiment and graphical models. Workshop on microarray data analysis, Regensburg, 2007.
  • Blöchl F, Gutch HW, and Theis FJ. On similarities of biological and technical networks. In Proc. DGMP 2006, pages 341-342, Regensburg, 2006.

 

Curriculum Vitae

Florian Blöchl studied physics at the University of Regensburg. During his studies he focused on quantum field theory, condensed matter physics and mathematics. He wrote his diploma thesis about "Independent Graph Analysis" at the Computational Intelligence and Machine Learning Group of Prof. Elmar W. Lang. He finished his PhD work in spring 2011.

His Erdös number is 4.