Our list of available software:
for downloading:
MausDB
This is an Open-Source mouse house and phenotyping result management system. Installation and admin guide, user manual, demo and template database, Perl scripts, as well as a live demo system can be found here
Cell-based simulation of dynamic expression patterns in the presomitic mesoderm
More information is available here (The Delta/Notch Pathway Project) on this website or in the following reference:
Tiedemann, H., Schneltzer, E., Zeiser, S., Rubio-Aliaga, I., Wurst, W., Beckers, J., Przemeck, G.K.H., Hrabé de Angelis, M. (2007): Cell-based simulation of dynamic expression patterns in the presomitic mesoderm. J Theoret Biol 248, 120-129
The publication, manuals and some demo videos can be found here(Science direct):
The Java source codes for different operating systems can be downloaded
- for 32-bit Windows clients (Java3D included)
- for Apple Macintosh clients (Java3D not included)
- for Linux distributions (e.g. SuSE) (Java3D included)
Advanced Retrieval Tool for SNPS (ARTS)
This program facilitates the retrieval of appropriate SNP markers and flanking sequences from given data-sets like mouse dbSNSP database. Further information you can get here (The ENU screen) on this website or in the following reference:
Klaften, M., Hrabé de Angelis, M. (2005): ARTS: A web-based tool for the setup of high-throughput genome wide mapping panels for the SNP genotyping of mouse mutants. Nucleic Acids Res 33, W496-W500
access (Advanced Retrieval Tool for SNPs)