Past Seminars

  • 01.04.19 Dr. Jan Peeken, Junior Group Leader Machine Learning and Radiomics in Radiation Oncology; Dr. Stefan Bartzsch, Group Leader Experimental Medical Physics  Radiomics in Radiation Oncology 
  • 18.03.19 Prof. Dr. Florian Erhard, Universität Würzburg: Institut für Virologie und Immunbiologie                                                                                                 scSLAM-seq reveals core features of transcription dynamics in single cells 
  • 11.03.19 Prof. Dr. Fabian V. Filipp, ICB                                                                  Cancer systems biology of melanoma 
  • 04.03.19   Dr. Michael Menden, Junior Group Leader at Helmholtz Institute                  Introduction of the Computational Biomedicine Group 
  • 18.02.2019    Ph.D. Michael Schaub, MIT                                                                        Learning from signals on graphs with unobserved edges
  • 11.02.2019    Ph.D. Markus List, Big Data in BioMedicine Group, Chair of Experimental Bioinformatics, TUM School of Life Sciences Weihenstephan, Technical University of Munich                                                                                          Overcoming challenges in the integrative analysis of epigenomic data
  • 04.02.2019    Dr. Boyan Bonev, Helmholtz Pioneer Campus                                         3D genome organization and cell fate in development
  • 28.01.2019    Katharina Nekolla & Ralf Schönmeyer, Senior Research Scientists at Definiens AG                                                                                                         Munich A data-driven approach to discover novel biomarkers by investigating complex immune cell patterns in multiple   tissue sections stained for immuno-oncology markers
  • 21.01.2019    Prof. Dr. Ingo Röder, TU Dresden                                                           Towards a better understanding of immune response effects in TKI-Treated Chronic Myeloid Leukemia
  • 18.12.2018    David Schnörr, Imperial College London                                             Efficient approximations of (spatio-temporal) stochastic biological processes using machine learning
  • 17.12.2018    Denis Schapiro, UZH                                                                            The metastatic melanoma ecosystem during RAF/MEK inhibition in patients
  • 10.12.2018    Dr. Michiel Adriaens, Maatricht University, MACSBIO                               Systems Medicine of Cardiometabolic Diseases at the Maastricht Centre for Systems Biology
  • 03.12.2018    Dr. Dominik Lutter, IDO                                                             Progression of Type 2 Diabetes Mellitus, a multi tissue communication breakdown? A systemic view
  • 26.11.2018    Prof. Dr. Ralf Jungmann, MPI of Biochemistry                             Towards Localizomics: Super-resolution Microscopy with DNA Molecules
  • 19.11.2018    Prof. Dr. Mustafa Khammash, ETH Zürich                                        Rationally-designed genetic control systems 
  • 12.11.2018    Prof. Eleftheria Zeggini, ITG                                                                        Translational genomics in osteoarthritis
  • 05.11.2018    Dr. Ingmar Glauche, TU Dresden                                                               Predicting the unseen: using mathematical models to speculate about biological mechanisms in hematopoiesis
  • 22.10.2018    Dr. Michael Stubbington, 10X Genomics                                                     Antigen receptor repertoires at single-cell resolution and the Human Cell Atlas
  • 22.10.2018    Dr. Luis Ospina-Forero, Alliance Manchester Business School, University of Manchester                                                                                                 Network Comparison via Subgraph counts
  • 15.10.2018    Dr. Benjamin Schubert, ICB                                                                      Computer-aided Cancer Vaccine Design
  • 27.09.2018    Luke Zappia, Murdoch Children’s Research Institute, University of Melbourn/Australia                                                                                                        Tools, simulations and trees for scRNA-seq data
  • 27.09.2018    Elyas Heidari, EMBL                                                                                   A network-based metric on signle-cell transcriptomics
  • 24.09.2018    Prof. Dr. Anne-Laure Boulesteix vom Institut für medizinische Informationsverarbeitung, Biometrie und Epidemiologie (IBE) der LMU                         On questionable research practices and reproducibility
  • 10.09.2018    Dr. Carsten Marr, Group Leader "Quantitative Single Cell Dynamics"/ICB   Computational Hematopathology for Improved Diagnostics
  • 03.09.2018    Dr.-Ing. Pouyan Mohajeran,Research Group Leader for "Machine Learning for Biomedical Imaging" IBMI                                                                 Challenges and opportunities in optoacoustic imaging from a machine learning perspective: recent efforts at IBMI
  • 06.08.2018    Prof. Manfred Warmuth, Dept of Computational Science, University of California, Santa Cruz                                                                                                  A more globally accurate dimensionality reduction method using triplets
  • 30.07.2018    Prof. Dr. Moritz Grosse-Wentrup, Department of Statistics, Ludwig-Maximilians-Universität München                                                                              Causal Concept Discovery
  • 23.07.2018    Prof. Dr. Dr. Torsten Haferlach, MLL Münchner Leukämielabor GmbH           From phenotype to whole genome sequencing: The disruption in diagnostic approaches in hematology
  • 16.07.2018    Dr. med. Karsten Kortüm, University Eye Hospital Munich (LMU)              Artificial intelligence in Ophthalmology - where are we? How did we get there? Where will go?
  • 02.07.2018    Dr. Anna Bauer-Mehren, Head Data Science RICM, Roche Diagnostics GmbH                                                                                                                               Personalized Healthcare and Real World Data Analysis
  • 25.06.2018    Dr. Jan Hasenauer, Data-driven Computational Modeling, ICB                Integrative Collaborative modelling in systems Medicine (INCOME)
  • 18.06.2018    Dr. Sebastian Bultmann, Faculty of Biology, LMU                                     TET1 drives global DNA demethylation via DPPA3-mediated inhibition of maintenance methylation
  • 11.06.2018    Dr. Nikola Popovic, School of Mathematics, University of Edinburgh           A Geometric Analysis of a Model for Micro-Electro Mechanical Systems (MEMS)
  • 04.06.2018    Dr. Gabriele Kastenmüller, Director (acting) IBIS                                       Old and new tales of human metabolism told by metabolomics
  • 07.05.2018    Dr. Nico Scherf, Max-Planck-Institut für Kognitions- und Neurowissenschaften, Leipzig                                                                                        Seeing is believing (?): Principles of Data Visualisation
  • 16.04.2018    Dr. Matteo Osella, University of Turin                                                         Quantitative characterization of the coordinated processes of cell growth, cell division and DNA replication in E.COLI
  • 09.04.2018    Thomas Stiehl, Institute of Applied Mathematics, Heidelberg University     Mathematical modeling of white blood cell formation and leukemia
  • 26.03.2018    Dr. Stefan H. Stricker, MCN Junior Research Group, Munich Center for Neurosciences, LMU BioMedical Center and Epigenetic Engineering, Institute of Stem Cell Research, HMGU                                                                                  Defining laws of identity
  • 19.03.2018    Prof. Dr. Crescencio Garcia-Segundo, Universidad Nacional Autonoma de Mexico                                                                                                                     On the generation of photoacoustic signals and the transport process in heterogeneous media: the Heaviside equation approach
  • 12.03.2018    Dr. Jordi Garcia-Ojalvo, Universitat Pompeu Fabra Barcelona, Dynamical Systems Biology lab                                                                                                                   Dynamical strategies for resource sharing by cells
  • 05.03.2018    Prof. Ulrich Schotten, Maastricht University, Netherlands                        Computational Framework for Subclassification of Atrial Fibrillation
  • 26.02.2018    Dr. Frank Filbir                                                                                      Mathematical Aspects of Ptychographical Imaging
  • 19.02.2018    Dr. John Marioni, EMBL, EBI; Wellcome Trust Sanger Institute; University of Cambridge UK and Prof. Rickard Sandberg, Ludwig Inst. for Cancer Research,Stockholm; Dept. of Cell and Molecular Biology (CMB) Karolinska Inst. Stockholm                                                                                                                          Using single-cell RNA-sequencing to provide insight into cell fate" by John Marioni and Deciphering gene regulation using single-cell transcriptomics" by Rickard Sandberg
  • 12.02.2018    Prof. Jan Baumbach, TUM                                                                   From gene panels to systems medicine - Or - What I learned about Arnold Schwarzenegger while studying breast cancer subtyping
  • 29.01.2018    Dr. Dr. Armin Piehler, Bioscientia Institut für Medizinische Diagnostik GmbH, Labor Karlsfeld                                                                                         Automated Interpretation of Medical Laboratory Test Results
  • 22.01.2018    Dr. Till Bartke, IFE                                                                                 Decoding chromatin modification states using chemical biology and proteomic approaches
  • 15.01.2018    Dr. Andrea Calabria, San Raffaele Telethon Institute for Gene Therapy, I-Milano                                                                                                              Molecular characterization of hematopoietic system reconstitution in metachromatic leukodystrophy patients   following hematopoietic stem cell gene therapy
  • 18.12.2017    Prof. Dr. Stephan Günnemann, TUM Department of Informatics                   Robust and Scalable Learning with Graphs
  • 11.12.2017    Dr. Antonio Scialdone, IES + ICB                                                                   Slicing up the cell nucleus with GAM: a new method to map chromatin topology
  • 20.11.2017    Prof. Fabian Theis                                                                                        Towards a human cell atlas and the involved computational challenges
  • 13.11.2017    Dr. Erika Kuchen, DKFZ Heidelberg                                                             Hidden long-range memory controls cell-cycle durations within lineages 
  • 06.11.2017    Dr. Kurt Schmoller, IFE                                                                                Size-dependent protein homeostasis and its role in cell size control
  • 23.10.2017    Dr. Christoph Zechner, MPI Dresden                                           Inference of single-cell dynamics from large-scale time-series data
  • 16.10.2017    Prof. Barbara Hammer, University Bielefeld                                                                   Nonlinear dimensionality reduction for contamination detection in single cell genome data
  • 09.10.2017    Dr. Anthony Gavalas, Faculty of Medicine, TU Dresden                      Identification of a stem cell population in the adult mouse pancreas
  • 09.10.2017    Prof. Alexander Löwer, TU Darmstadt                                                     To respond and adapt: dynamics and variability of SMAD signaling in single cells  
  • 02.10.2017    Dr. Dragan Bosnacki, Technical University Eindhoven, NL                                             Efficient reconstruction of biological networks from perturbation experiments
  • 25.09.2017    Dr. Thomas Wittenberg, Fraunhofer IIS                                                           Deep Learning and no end? Opportunities and limits to digital image analysis in Digital Pathology
  • 18.09.2017    Dr. Beth Cimini, Broad Institute, Cambridge, Massachusetts                                      Using high-content imaging to get the most of your microscopy
  • 27.07.2017    Prof. Timm Schroeder, ETH Zürich, Dept. of Biosystems Science and Eng.                                                                                                                                     Long-term single cell quantification: New tools for old questions
  • 24.07.2017    Prof. Frithjof Lutscher, Department of Mathematics and Statistics, University of Ottawa, Canada                                                                                      How predator behavior and seasonality affect predator-prey dynamics
  • 20.07.2017    Prof. Julien Gagneur, chair for Computational Biology, TUM                                                                  Genetic basis of gene regulation: Genome-wide models and applications to rare disease diagnostics
  • 17.07.2017    Dr. Stefan Canzar, Genzentrum LMU                                                                   Local goes global. A glimpse at the bigger picture by algorithm engineering                                           
  • 10.07.2017    Lars Velten, EMBL Heidelberg                                                                           Integrated single-cell transcriptomics and functional quantification of development
  • 03.07.2017    Dr. Christian Conrad, DKFZ BioQuant Center/Intelligent Imaging Group, Heidelberg                                                                                               Drug sensitivity screening and single sequencing of 3D cancer organoids
  • 26.06.2017    Prof. Pascal Falter-Braun, LMU Fakultät für Biologie und Direktor Institut für Netzwerkbiologie                                                                                      Systems analysis of abiotic and biotic stress response networks by interactome network analysis
  • 19.06.2017    Dr. Aneta Koseska, AG Cellular Cognition, Department of Systemic Cell Biology, Max Planck Institute for Molecular Physiology, Dortmund, Germany             The interdependence of epidermal growth factor receptor with tyrosine phosphatases determines signaling response
  • 22.05.2017    Pablo Navarro Gil, Principal Investigator, Institute Pasteur, Paris             Mitotic inheritance of TF binding in pluripotent cells
  • 15.05.2017    Prof. Bernhard Küster, Chair of Proteomics and Bioanalytics, Technische Universitaet Muenchen                                                                         Chemical proteomics reveals the target landscape of clinical kinase inhibitors 
  • 05.05.2017    Prof. Hans-Peter Meinzer, Leiter der Abteilung Medizinische und Biologische Informatik am DKFZ                                                                       Medical Imaging wir sind nicht da, aber wir sind unterwegs
  • 24.04.2017    Prof. Dr. Steffen Waldherr, KU Leuven/NL, CIT, Bio- & Chemical Systems Technology, Reactor Engineering and Safety Section                                             Bilevel dynamic optimization of metabolic-genetic networks for bioprocess monitoring and control
  • 10.04.2017    Dr. Stephan Schaller - Senior Scientist QSP - Sanofi-Aventis                    Biosimulation: prospects for drug therapy
  • 03.04.2017    Courtney W. Hanna, Epigenetics Programme, Babraham Institute, Cambridge, CB22 3AT, UK                                                                                       Using the oocyte to investigate the genomic targeting of epigenetic modifications
  • 27.03.2017    Prof. Gregory D. Hager,  Director, Malone Center for Engineering in Healthcare, Johns Hopkins University                                                               Towards Methods for Quantifying Interventional Healthcare
  • 20.03.2017    Dr. Antoine-Emmanuel Saliba, University of Wuerzburg, Biosystems Engineering, Molecular Biology, Systems Biology                                              Single-cell RNA-seq ties macrophage polarization to growth rate of intracellular Salmonella
  • 13.03.2017    Prof. Hans-Werner Mewes,Technische Universität München, Chair of Bioinformatics                                                                                                   Bioinformatics - looking back and ahead. 30 years in the game, what comes next
  • 06.03.2017    Dr. Wolfgang Huber, Group Leader and Senior Scientist, EMBL Heidelberg                                                                                                                   Multi-omics and statistical computing
  • 27.02.2017    Prof. Dr. Fahri Saatcioglu, Dept. of Biosciences, University of Oslo/Norway                                                                                                         Androgens and stress signaling in prostate cancer
  • 20.02.2017    Dr. Carsten Marr, Quantitative Single Cell Dynamics, Institute of Computational Biology                                                                                                 Quantifying cellular dynamics of stem cell decisions
  • 13.02.2017    Prof. Dr. Barbara Conradt, Biozentrum der LMU München                       miRNAs cooperate in apoptosis regulation during C. elegans development
  • 13.02.2017    Dr. Stephan Schaller - Senior Scientist QSP - Sanofi-Aventis                   Biosimulation: prospects for drug therapy
  • 23.01.2017    Prof. Dr. Bernhard Küster, Chair of Proteomics and Bioanalytics, Technische Universität München                                                                     Chemical proteomics reveals the target landscape of clinical kinase inhibitors
  • 16.01.2017    Dr. Sabine Fischer, Buchmann Institute of Molecular Life Science (BMLS), Goethe University, Frankfurt                                                                          Neighbours matter – Quantitative analysis of the three-dimensional cell neighbourhood in tissues                       
  • 09.01.2017    Prof. Sergei Pereverzyev , RICAM in Linz, Austria                         Aggregation by means of a linear functional strategy - Case study: Prediction of Nocturnal Hypoglycemia 
  • 19.12.2016    Dr. Florian Büttner, TUM                                                               Scalable latent variable models separate biological drivers from confounding effects in single-cell RNA-seq data
  • 12.12.2016    Prof. Dr. Yasumasa Nishiura, Tohoku University, Sendai, Japan   Dynamics of spatially localized patterns in heterogeneous media and its application to adaptive behaviors of Physarum 
  • 05.12.2016    Prof. Dr. Kilian Eyerich, Department of Dermatology and Allergy, Technical University of Munich                                                                           Inflammatory skin diseases - model to pave the way for precision medicine in complex diseases
  • 28.11.2016    Dr. Hagen Scherb, ICB                                                                         From Chernobyl to Fukushima - radiation induced genetic effects at low dose 
  • 24.11.2016    Dr. Oliver Stegle, European Bioinformatics Institute (EMBL-EBI)       High-dimensional association genetics applied to play-omics analyses of iPS cell models
  • 21.11.2016    Prof. Dr. Bjoern Menze, Computer Science, Technical University of Munich                                                                                                                   Image based modeling of tumor growth
  • 15.11.2016    Dr. Andreas Dräger, Center for Bioinformatics Tübingen (ZBIT), Dept. Kognitive Systems, University of Tübingen                                                                   The ZBIT Systems Biology and Web Service Collection                                                                           
  • 17.10.2016    Prof. Dr. Natalie Germann, Fluid Dynamics of Complex Biosystems, School of Life Sciences Weihenstephan, TUM
    Nonequilibrium thermodynamic modeling of multiphase flows

  • 13.10.2016    Dr. Alejandro Villaverde, IIM-CSIC, Vigo, Spain
    Analysing identifiability of dynamic systems biology models

  • 05.09.2016    Dr. Clemens Kreutz, Physics Department, Center for Biosystems Analysis (ZBSA), University of Freiburg
    New Concepts for Assessing the Performance of Computational Methods

  • 01.09.2016    Prof. Charles K. Chui, Stanford University, California, U.S.A.
    Data-driven Signal Processing and Understanding with Applications to Tele-Health Care and Early Diagnosis

  • 01.08.2016    Dr. Michael Floßdorf, Institute for Medical Microbiology, Immunology and Hygiene, TU München
    Stochastic developmental programs of T cells inferred from single cell fate mapping in vivo

  • 28.07.2016    Dr. Anne Grosse-Wilde, Huang Lab, Institute for Systems Biology, Seattle, WA
    Identification and implication of stemness of the intermediate epithelial/mesenchymal (E/M) state and its association with poor outcomes in breast cancer

  • 25.07.2016    Prof. Dr. Verena Wolf, Department of Computer Science, Saarland University, Saarbrücken
    Generalized Method of Moments for Estimating Parameters of Stochastic Reaction Networks

  • 22.07.2016    Prof. Dr. Wolfgang Enard, Chair Anthropology and Human Genomics, Department Biology II, Ludwig Maximilians University Munich
    Evolution of human speech and single cell genomics

  • 14.07.2016    Dr. Dr. Christof Winter, Institute of Clinical Chemistry and Pathobiochemistry, Klinikum rechts der Isar, TUM
    Personalized treatment and monitoring of cancer patients through analysis of DNA and RNA in peripheral blood

  • 11.07.2016    Prof. Dr. Maria Elena Torres-Padilla, Director, IES, HMGU
    Epigenetic regulation of early development in the mouse

  • 27.06.2016    Dr. Yu Wang, Leibniz-Rechenzentrum, Garching
    Towards a Cloud Solution for Next Generation Computation in Life Science

  • 20.06.2016    Prof. Dr. Robert Schneider, Director, IFE, HMGU
    Approaching single-cell “epigenetic” memory using microfluidics

  • 13.06.2016    Dr. Michael J. Ziller, Max-Planck Institute of Psychiatry, München
    Dissecting gene regulatory networks in pluripotency and differentiation

  • 06.06.2016    Dr. Frederik Graw, Center for Modeling and Simulation in the Biosciences, Heidelberg University
    Determining the spread of hepatitis C virus in vivo and in vitro

  • 13.05.2016    Quincey Justman, Scientific Editor of Cell Systems
    "Clear writing leads to clear thinking and vice versa:” Why is it hard to create this virtuous cycle in systems biology?

  • 02.05.2016    Dr. Alexander Skupin, Integrative Cell Signalling Group, Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg
    Dissecting dynamics of cellular heterogeneity in health and disease

  • 25.04.2016    Prof. Dr. Marc Friedländer, Computational RNA Biology Group, Stockholm University, Sweden
    miRNA Discovery and functions in single cells

  • 25.04.2016    Dr. Julijana Gjorgjieva, Max Planck Institute for Brain Research, Frankfurt
    Activity-dependent organizing principles in developing networks and sensory populations

  • 18.04.2016    Ivan Kondofersky, ICB
    Significance test for differences between paired functional data - theory and applications

  • 11.04.2016    Prof. Dr. Avidan U. Neumann, Institute of Environmental Medicine, HMGU; UNIKA-T, Augsburg; Berlin-Brandenburg Center for Regenerative Therapies (BCRT), Charite University Hospital, Berlin
    Analysis of T-Cell repertoire kinetics on single clone level after Influenza vaccination – original antigenic sin?

  • 21.03.2016    Prof. Dr. Dirk Metzler, Statistical Genetics Group, Biozentrum Martinsried, LMU München
    The evolution of slave rebellion in ants

  • 14.03.2016    Dr. Dominic Grün, Quantitative Single Cell Biology, MPI of Immunobiology and Epigenetics, Freiburg
    De novo prediction of stem cell identity using single-cell transcriptome data

  • 29.02.2016    Prof. Goro Akagi, Graduate School of System Informatics, Kobe University, Japan
    Non-standard irreversible processes and nonlinear evolution equations

  • 22.02.2016    Dr. Jürgen Pahle, Center for Modelling and Simulation in the Biosciences (BIOMS), University of Heidelberg
    Biochemical models, variability and information

  • 15.02.2016    Prof. Dr. med. Christina Zielinski, Institut für Medizinische Mikrobiologie, Immunologie und Hygiene, Technische Universität München
    Identification and regulation of pro- and anti-inflammatory T helper cell functions in human health and disease

  • 08.02.2016    Dr. Elham Bavafaye Haghighi, ICB
    Quantitative Analysis of Gene Expression Based on Long Range Enhancer Data

  • 04.02.2016    Dr. Erik van den Akker, Molecular Epidemiology, Leiden University Medical Center, The Netherlands and Pattern Recognition & Bioinformatics, Delft University of Technology, The Netherlands
    Uncompromised ten-year survival of oldest old carrying somatic mutations in DNMT3A and TET2

  • 01.02.2016    Dr. Marion Engel, HMGU-ASC
    Differential Influence on Bacterial Community Structure in Subtypes of Mild to Moderate Chronic Obstructive Pulmonary Disease

  • 25.01.2016    Dr. Annalisa Marsico, Otto-Warburg Laboratory, RNA Bioinformatics, Max Planck Institute for Molecular Genetics, Berlin
    Predictive models of non-coding RNA regulation and function

  • 18.01.2016    Prof. Dr. Nicole Radde, Institute of Systems Theory and Automatic Control, University of Stuttgart
    Sampling-based Bayesian approaches reveal the importance of quasi-bistable behavior in cellular decision making processes

  • 14.12.2015    Sodbo Sharapov, Institute of Cytology and Genetics, Novosibirsk, Russia and Novosibirsk State University, Novosibirsk, Russia HMGU-AME
    Dissecting phenomenon of variance heterogeneity in gene-gene interaction scan on human serum metabolome

  • 07.12.2015    Prof. Dr. Ulrich Gerland, Theory of Complex Biosystems, Physik Department, TU München
    Physical analysis of nucleosome positioning

  • 16.11.2015    Dr. Illya Karabash, Institute of Applied Mathematics and Mechanics, NAS of Ukraine
    Recovery of periodicities hidden in heavy-tailed noise

  • 22.10.2015    Ruth Pfeiffer, Ph.D., National Cancer Institute, Division of Cancer Epidemiology & Genetics, Biostatistics Branch, Bethesda, Maryland
    An efficient procedure to combine biomarkers with limits of detection for risk prediction

  • 12.10.2015    Dr. Frank Filbir, ICB
    Parameter Estimation in Exponential Sums

  • 05.10.2015    Dr. Jan Hasenauer, ICB
    Data-driven Computational Modeling

  • 14.09.2015    Dr. Oliver Fuchs, Department of Pediatric Allergology, Dr von Hauner Children’s Hospital, Ludwig Maximilians University, Munich and Comprehensive Pneumology Center, Munich
    From Early Beginnings to Chronic Disease, the KIRA/ERA Cohorts of the German Center for Lung Research (DZL)

  • 10.08.2015    Dr. Julio R. Banga, (Bio)Process Engineering Group, IIM-CSIC (Spanish Council for Scientific Research), Vigo, Spain
    Perspectives on reverse and forward engineering of biological systems

  • 30.07.2015     Prof. Dr. Roland Eils, Theoretical Systems Biology, DKFZ, Heidelberg
    The long march from data to knowledge in systems medicine

  • 27.07.2015    PD Dr. Marcel Scheideler, HMGU-IDC
    MicroRNAs in human fat cell development - Lessons we learned

  • 20.07.2015    Dr. Matthias Heinig, ICB
    Genetic and Epigenetic Gene Regulation

  • 13.07.2015    Prof. Dr. Dirk Langemann, Institut Computational Mathematics, TU Braunschweig
    Mathematical models for resistance development, metabolism, inheritance and adaptation

  • 02.07.2015    Sebastian Mayer, Institut für Numerische Simulation, Universität Bonn
    Dimensionality reduction with Johnson-Lindestrauss embeddings in machine learning

  • 29.06.2015    Prof. Dr. Ines Mandic Mulec, Chair of Microbiology, Department of Food Science and Technology, University of Ljubljana, Ljubljana, Slovenia
    Social games and quorum sensing of Bacillus subtilis

  • 22.06.2015    Dr. Christiane Fuchs, ICB
    The Prostate Cancer DREAM Challenge

  • 15.06.2015    Dr. Ruben Seyfried, ICB
    A Fast Algorithm for the Inversion of the Spherical Mean Operator

  • 10.06.2015    Prof. Dr. Hans Lehrach, Max-Planck-Institue for Molecular Genetics, Dahlem Center for Genome Research and Medical Systems Biology, Alacris Theranostics GmbH, Berlin
    Next generation sequencing: a key factor in the personalization of medicine

  • 08.06.2015    Dr. Rodolfo García-Contreras, Department of Microbiology and Parasitology, Faculty of Medicine, UNAM, Mexico City, Mexico
    Is the selection of resistance against quorum quenchers possible?

  • 01.06.2015    Dipl.-Ing. Martin Kiechle, Geometrische Optimierung u. maschinelles Lernen, Fakultät für Elektrotechnik und Informationstechnik, TU München
    A Joint Intensity and Depth Co-sparse Analysis Model for Depth Map Super-resolution

  • 18.05.2015    Dr. Ralph Neumüller, Genzentrum, LMU München
    Binary cell fate decisions in stem cell lineages: a systems genetics approach

  • 11.05.2015    PD Dr. Josef Obermaier, ICB
    A model for the radiotracer 18F-choline

  • 04.05.2015    Prof. Dr. Michael Schloter, HMGU-EGEN
    Linking Environmental Microbiomes to Human Health

  • 27.04.2015    Dr. Jan Christian Kaiser, HMGU-ISS
    Integration of molecular biology and epidemiology in a mechanistic model for colon carcinogenesis

  • 20.04.2015    Prof. Dr. Dr. Fabian Theis, ICB
    Computational single cell biology: some results and many challenges

  • 13.04.2015    Dr. Romain Yvinec, Biology & Bioinformatics of Signalling Systems, Physiologie de la Reproduction et des Comportements, Centre Inra de Tours, Val de Loire, France
    Stochastic single gene expression model: analytical results on bursting and rate production estimation

  • 31.03.2015    Dr. Nada Sissouno, Lehrstuhl für Mathematik mit Schwerpunkt Digitale Bildverarbeitung, Universität Passau
    TV inpainting with tensor product splines

  • 30.03.2015    Dr. Dominik Lutter, HMGU-IDO
    Understanding obesity. Data mining in heterogeneous data

  • 26.03.2015    François Cassier, NAG representative for Europe
    Presentation of the NAG Scientific Software available with the NAG license at HMGU

  • 23.03.2015    Prof. Dr. Daniel Razansky, HMGU-IBMI
    Computational and quantification challenges in high performance optoacoustic imaging

  • 16.03.2015    Dr. Klaus F. X. Mayer, HMGU-PGSB
    Slicing the wheat genome

  • 12.03.2015    Dr. Martin  Ehler, Fakultät für Mathematik, Universität Wien
    Arranging lines and planes

  • 09.03.2015    Steffen Sass, ICB (Young Investigators Seminar)
    How next-generation sequencing technologies advance analyses of single cells and the epigenome

  • 26.02.2015    Dr. Stefanie Sonner, Fachbereich Mathematik, Universität Kaiserslautern
    Verifying mathematical models: invariance criteria for stochastic systems

  • 23.02.2015    Dr. Jan Christian Kaiser, HMGU-ISS
    Integration of molecular biology and radiation epidemiology in mechanistic models of carcinogenesis

  • 23.02.2015    Dipl.-Ing. Robert Dürr, Institut für Automatisierungstechnik (IFAT), Otto-von-Guericke Universität, Magdeburg
    Efficient Approximation of Moments of Multi Dimensional Population Balance Equations

  • 23.02.2015    Harald Jenull, UnternehmerTUM, TU München
    Be entrepreneurial! - Opportunities for founders at TUM

  • 20.02.2015    Dr. Ronny Bergmann, Fachbereich Mathematik, Universität Kaiserslautern
    Inpainting of Cyclic Data Using First and Second Order Differences

  • 19.02.2015    Prof. Dr. Markus Haltmeier, Department of Mathematics, University of Innsbruck, Innsbruck, Austria
    Inversion of conical Radon transforms and applications

  • 18.02.2015    Miroslav Bacak, ParisTech, Paris, France
    Computing medians and means of phylogenetic trees

  • 16.02.2015    PD Dr. Kay Nieselt, Integrative Transcriptomics, Center for Bioinformatics Tübingen (ZBIT), Universität Tübingen
    The SuperGenome - a new concept for comparative genomics and beyond

  • 09.02.2015    Dr. Florian Büttner, ICB
    Machine learning methods to dissect heterogeneities in single-cell profiling data

  • 02.02.2015    Prof. Dr. Guido Sanguinetti, School of Informatics & SynthSys, University of Edinburgh, Edinburgh
    Learning from qualitative properties of stochastic dynamical systems

  • 26.01.2015    Prof. Dr. Wolfgang Enard, Anthropology and Human Genetics, Department Biology II, LMU Munich
    Functional Primate Genomics

  • 19.01.2015    Sabine Hug, ICB (Young Investigators Seminar)
    High-Dimensional Bayesian Parameter Estimation: A Case Study for a Model of JAK2/STAT5 Signaling

  • 12.01.2015    Prof. Dr. Tanja Stadler, Department of Biosystems Science & Engineering, ETH Zürich, Basel, Schweiz
    Novel phylodynamic tools reveal insight into epidemic spread of HCV, HIV and the current West Ebola epidemic

  • 15.12.2014    Prof. Dr. Christian Schulz, Klinikum der Universität München, Medizinische Klinik und Poliklinik III
    Yolky beginnings: the origin of macrophages

  • 08.12.2014    PD Dr. Hans Zischka, HMGU-TOXI
    Mitochondrial Toxicology

  • 02.12.2014    Karsten Kuritz, Institute of Systems Theory and Automatic Control, University of Stuttgart
    Determining protein level variations along the cell cycle from snap-shot population measurements

  • 01.12.2014    Prof. Dr. Gil Westmeyer, HMGU-IBMI
    Analysis of temporal patterns in molecular imaging data

  • 26.11.2014    Dr. Vikram Sunkara, University of Adelaide, Australia
    Constructing Probability Distributions for Parameter Inference of Bio-Chemical Reaction Networks

  • 24.11.2014    Dr. Hagen Scherb, ICB
    Radiation induced sex-linked lethal mutations in humans

  • 17.11.2014    Dr. Stefan Stricker, HMGU-ISF
    Changing of the guards - New approaches in epigenetic reprogramming

  • 10.11.2014    Dr. Judith Perez-Velazquez, ICB
    Investigating quorum sensing regulation and its heterogeneity in Pseudomonas syringae on leaves

  • 03.11.2014    Dr. Andreas Weinmann, ICB
    Reconstructing signals with jumps

  • 20.10.2014    Dr. Kristina Voigt, ICB
    Impact of Chemicals and Ionizing Radiation on Environment and Human Health: Need for Adapted Modeling Techniques

  • 14.10.2014    Prof. Dr. Ursula Klingmüller, Systems Biology of Signal Transduction, DKFZ, Heidelberg
    A Systems Medicine Approach - Unraveling the Role of Epo in Lung Cancer

  • 14.10.2014    Prof. Are Magnus Bruaset, Section Director for Computing and Software, Simula, Lysaker, Norway
    Simula in a Nutshell

  • 13.10.2014    Prof. Dr. Ulrich Mansmann, Institut für medizinische Informationsverarbeitung, Biometrie und Epidemiologie (IBE), LMU München
    Indirect Comparison of Interaction Graphs

  • 06.10.2014    Prof. Dr. Axel Imhof, Adolf-Butenandt Institut, LMU München
    Global and specific responses of the histone acetylome to systematic perturbation

  • 30.09.2014    Dr. Martin Storath, Biomedical Imaging Group, EPFL, Lausanne
    Jump-sparse signal and image reconstruction using Potts-functionals

  • 29.09.2014    Dr. Sabine Schilling, Institute of Molecular Systems Biology, ETH Zürich
    How receptors shape a ligand's signaling: Modeling Wg-receptor interactions

  • 29.09.2014    Dr. Matthias Heinig, Max-Planck-Institut für Molekulare Genetik, Berlin
    Using genetic variation to decode gene regulatory networks

  • 29.09.2014    Univ.-Prof. Dr. Kristian Bredies, Institut für Mathematik und Wissenschaftliches Rechnen, Universität Graz
    Total generalized variation: From regularization theory to applications in imaging

  • 22.09.2014    Prof. Dr. Messoud Efendiyev, ICB
    Multicomponent biofilm models

  • 08.09.2014    Prof. Dr. Heinz Koeppl, Bioinspired Communication Systems Lab, TU Darmstadt
    Inference and analysis of heterogeneous single-cell dynamics

  • 31.07.2014    Prof. Dr. Thomas G. Schulze, Institute for Psychiatric Phenomics and Genomics (IPPG), Ludwig Maximilians Universität, München
    Psychiatric genetics 2020: a roadmap approach

  • 28.07.2014    Prof. Dr. Thomas Höfer, Theoretische Systembiologie, DKFZ Heidelberg
    Stem cell dynamics by numbers

  • 21.07.2014    Dr. Jana Gevertz, Department of Mathematics and Statistics, College of New Jersey, Ewing, NJ
    Exploring the emergence of anti-cancer drug resistance through a spatial model

  • 14.07.2014    Professor Dr. Jianhong Wu, York University, Canada
    Nonlinear Dynamics and Pattern Recognition in OneHealth

  • 07.07.2014    Dr. Christina Brandt, Institut für Mathematik, Universität Osnabrück
    A sparse deconvolution method for fluorescence microscopy

  • 30.06.2014    Dr. Elisabeth Georgii, HMGU-BIOP
    Learning from multiple data sources: computational systems biology case studies

  • 26.06.2014    Prof. Arieh Warshel, University of Southern California
    Distinguished Professor of Chemistry and Biochemistry, 2013 Nobel Prize in Chemistry
    Multiscale modeling of the function of biological systems

  • 23.06.2014    Prof. Dr. Michal Komorowski, Institute of Fundamental Technological Research, Polish Academy of Sciences, Warschau, Polen
    Statistical methods to understand information processing in living cells

  • 16.06.2014    Prof. Dr. Sonja Greven, Institut für Statistik, Ludwig Maximilians Universität, München
    Functional Additive Mixed Models

  • 02.06.2014    Dr. Christian Gieger, HMGU-IGE
    Multi-omics analyses in the KORA study

  • 26.05.2014    Prof. Dr. Peter B. Becker, Adolf-Butenandt-Institut, Ludwig Maximilians Universität, München
    A matter of life and death: how the X chromosome in flies is targeted for two-fold activation

  • 20.05.2014    Dr. Olga Ucar, Developmental Immunology, DKFZ Heidelberg
    Maintenance of central tolerance: from microRNAs to stem cells

  • 19.05.2014    Prof. Dr. Hermann Eberl, Department of Mathematics and Statistics, University of Guelph, Canada
    Numerical and computational aspects of degenerate biofilm  models

  • 14.05.2014    Dr. Ronny Bergmann, Image Processing Group, TU Kaiserslautern
    Variational Denoising of Cyclic Data with First and Second Order Differences

  • 12.05.2014    Dr. Nick Jagiella, ICB
    Agend-based modeling of cells and tissues

  • 05.05.2014    Dr. Bettina Knapp, ICB
    Computational Phenomics

  • 28.04.2014    Dr. Ralf Hielscher, Department of Mathematics, Chemnitz University of Technology
    Fast global optimization on manifolds

  • 14.04.2014    Dr. Alberto Busetto, Automatic Control Laboratory, ETH Zürich
    Optimizing the Informativeness of Biological Models

  • 09.04.2014    Dr. Tom Maerz, OCCAM, University of Oxford, UK
    Non-linear Anisotropic Diffusion Filtering of Images on Curved Surfaces

  • 07.04.2014    Prof. Dr. Martin Schuster, Department of Microbiology, Oregon State University, Corvallis, OR
    Bacterial cooperation and metabolic self-limitation of cheating

  • 31.03.2014    Prof. Dr. Dagmar Iber, Computational Biology Group, Department of Biosystems Science and Engineering, ETH Zürich
    From Networks to Pattern Formation - Computational Models of Organogenesis

  • 27.03.201    Dr. Frank Filbir, ICB
    Approximation of Functions on Data Defined Manifolds and Unstructured Sets

  • 27.03.201    Dr. Benedikt Brors, Computational Oncology, German Cancer Research Center, Heidelberg
    Genetic landscapes of cancer cells - what can we learn about oncogenesis?

  • 26.03.201    Dr. Maximilian Baust, Chair for Computer Aided Medical Procedures & Augmented Reality, TU München
    Sobolev Active Contours

  • 24.03.2014    Prof. Dr. Korbinian Strimmer, Statistics and Computational Biology Group, IMISE, Universität Leipzig
    Algorithms for Proteomics Mass Spectrometry Analysis to Identify Pancreas Cancer Biomarkers

  • 19.03.201    Dr. Robert Küffner, HMGU-IBIS
    Analysis and interpretation of NGS and other high throughput experiments

  • 17.03.2014    Dr. Linus Görlitz, Head of Complex Systems Modeling, Bayer Technology Services GmbH, Leverkusen
    Bayesian PBPK modeling

  • 10.03.2014    Prof. Dr. Dirk Langemann, Institute of Computational Mathematics, TU Braunschweig
    A mathematical model for the modeling process and applications in life sciences

  • 28.02.2014    Marta Matos, Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Hørsholm, Denmark
    Network inference: Extension of a linear programming model for time-series data

  • 24.02.2014    Michael Schwarzfischer, ICB (Young Investigators Seminar)
    Quantification and analysis of single-cell protein dynamics in stem cells using time-lapse microscopy

  • 19.02.2014    Dr. Andreas Dötsch, Microbial Genomics and Bioinformatics, Institute of Functional Interfaces, Karlsruhe Institute of Technology
    Functional genomics in mixed microbial communities

  • 17.02.2014    Prof. Dr. Tim Hucho, Abteilung für experimentelle Anästhesiologie und Schmerzforschung, Universitätsklinik Köln
    Intracellular Signaling Switches Rule Over Pain Sensitivity

  • 13.02.2014    Prof. Dr. Stefano De Marchi, Department of Mathematics, University of Padua, Padua, Italy
    Application of kernel-based methods to medical image reconstruction

  • 10.02.2014    Dr. Ivo Sbalzarini, Max Planck Institute of Molecular Cell Biology and Genetics, Dresden
    Model-based bio-image analysis using Bayesian segmentation

  • 03.02.2014    Dr. Hernan Lopez-Schier, Research Unit Sensory Biology and Organogenesis, HMGU
    Theoretical-experimental approach to a morphogenetic gene network

  • 27.01.2014    PD Dr. Wolfgang zu Castell, ICB
    Embracing Complexity

  • 20.01.2014    Dr. Johanna Mazur, Core Facility Bioinformatik, Institut für Medizinische Biometrie, Epidemiologie und Informatik, Universität Mainz
    RNA-Seq Data: From Statistical Analysis to Experimental Design

  • 16.01.2014    Prof. Dr. Ileana Streinu, Smith College and University of Massachusetts Amherst, USA
    Protein rigidity and flexibility analysis: a combinatorial approach

  • 13.01.2014    Prof. Dr. Manfred Claassen, Institute of Molecular Systems Biology, ETH Zürich
    Statistical multiscale models of biological systems at single cell resolution

  • 19.12.2013    Dr. Joseph Zhou, Institute for Systems Biology, Seattle USA
    Landscape construction for cell differentiation & reprogramming

  • 18.12.2013    Prof. Dr. Benoit Perthame, Laboratoire J.-L. Lions, Université Pierre et Marie Curie, CNRS and INRIA, Paris, France
    Models of tumor growth and therapy
    Joint ICB/TUM Semiar

  • 18.12.2013    Thomas Wiatowski, Communication Technology Laboratory, ETH Zürich, Schweiz
    Fast kernel based reconstruction in photoacoustic tomography

  • 16.12.2013    Dr. Klaus Hahn, ICB
    Disrupted connectivity of human brain networks in Alzheimer’s disease – revealed by a novel framework to analyze edge distributions in weighted networks

  • 11.12.2013    Dr. Jakob Lemvig, Technical University of Denmark, Lyngby, Denmark
    Shearlet frames and optimally sparse approximations

  • 09.12.2013    Prof. Dr. Matthias Schmid, Institut für Statistik, Ludwig-Maximilians-Universität, München
    Analysis of concordance measures for the evaluation of biomedical survival models

  • 27.11.2013    Dr. Rachel Errington, School of Medicine, Cardiff University, Cardiff, UK and Dr. Imtiaz Khan, Imaging Platform, Broad Institute of Harvard and MIT, Cambridge, MA
    Images-to-numbers-to in silico models – computational approach to understand dynamic cellular behaviour in an interdisciplinary research context

  • 18.11.2013    Prof. Dr. Marc-Thorsten Hütt, Computational Systems Biology, School of Engineering & Science, Jacobs University, Bremen
    Network-enhanced interpretation of gene expression profiles

  • 11.11.2013    Prof. Dr. Barbara Kaltenbacher, Institut für Mathematik, Alpe-Adria Universität Klagenfurt
    Inverse Problems: Applications and Regularization Techniques

  • 04.11.2013     Prof. Dr. Joachim Rädler, Lehrstuhl für Experimentalphysik, LMU München
    Time-lapse microscopy in single-cell micro-arrays - gene expression, cell fate decisions and cell migration

  • 29.10.2013    Fabian Froehlich, ICB
    PhyscoFilter - Clean different

  • 28.10.2013    Prof. Dr. S. Prigarin, Institute of Computational Mathematics and Mathematical Geophysics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia
    Stochastic Simulation

  • 21.10.2013    PD Dr. Volker Hösel, Zentrum Mathematik, TU München
    Bayesian networks in the pharmaceutical industry

  • 14.10.2013    Dr. Laurant Demaret, ICB
    Delaunay Triangulations in Image Processing

  • 07.10.2013    Dr. Burkhard Hense, ICB
    Interactions in Biological Systems

  • 02.10.2013    Dr. Fordyce Davidson, University of Dundee, Scotland
    Cell Differentiation in Bacterial Biofilms

  • 01.10.2013    Prof. Dr. Gunnar Schotta, Adolf-Butenandt-Institute, LMU München
    Epigenetic regulation of lineage transitions

  • 26.09.2013    Dr. Andreas Raue, ICB
    Challenges Beyond Identifiability Analysis

  • 23.09.2013    Dr. Nikola Müller, ICB
    Regulatory Networks

  • 16.09.2013    Prof. Dr. Bertie Gottgens, Cambridge University Department of Haematology, Cambridge Institute for Medical Research, Cambridge UK
    Genome-scale analysis of regulatory programs in distinct blood cell lineages

  • 12.09.2013    Dr. Holger Kohr, Institut für Angewandte Mathematik, Universität des Saarlandes, Saarbrücken
    Advanced models in 3D electron microscopy

  • 09.09.2013    Dr. Jakob Macke, Max Planck Institute for Biological Cybernetics, Tübingen
    Characterizing the dynamics of large neural populations

  • 05.08.2013    Dr. Silke Hauf, Friedrich Miescher Laboratory of MPG, Tübingen
    Speed, precision and robustness: How can mitosis have it all?

  • 01.08.2013    Prof. Hrushikesh N. Mhaskar, Department of Mathematics, California Institute of Technology
    Representation of functions of high dimensional unstructured data

  • 29.07.2013    Dr. Jan Hasenauer, ICB
    Data-driven modeling of dynamical systems

  • 22.07.2013    Dr. Carsten Marr, ICB
    Quantitative single cell dynamics

  • 15.07.2013    Prof. Dr. Johannes Müller, Zentrum Mathematik, TU München
    Adaptive Dynamics

  • 08.07.2013    Dr. Frank Filbir, ICB
    Summability Operators and Photoacoustic Tomography

  • 04.07.2013    Faidra Stavropoulou, ICB
    Real-Time Optimal Control of the Euglycemic Clamp in Mice

  • 01.07.2013    Dr. Claudia Plant, ICB
    The Junior Research Group iKDD (Integrative Knowledge Discovery in Databases)

  • 27.06.2013    Harald Grallert, AME, HMGU
    Genetics of type 2 diabetes and glycemic traits

  • 25.06.2013    Dr. Christian Rieger
    Sampling inequalities for regularized reconstruction methods, with applications to uncertainty quantification

  • 24.06.2013    Dr. Florian Büttner, ICB
    Machine Learning in Computational Biology

  • 17.06.2013    Prof. Dr. Bertram Müller-Myhsok, MPI für Psychatrie, München
    Genome-wide interaction analysis - principle, methods, and selected results

  • 14.06.2013    Dr. Ramon Grima, University of Edinburgh
    New modeling tools for stochastic systems biology

  • 12.06.2013    Prof. Wojtek Czaja, Norbert Wiener Center, Department of Mathematics, University of Maryland
    Data fusion via operator analysis

  • 10.06.2013    Dr. Christiane Fuchs, ICB
    Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles

  • 06.06.2013    Hamid Rezatofighi, Australian National University
    Multi-target tracking in time-lapse cell microscopy sequences using the Bayesian framework

  • 03.06.2013    Dr. Jan Krumsiek, ICB
    Systems Metabolomics

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