Staff

Source: HMGU

Dr. Christoph Ogris
PostDoc and Deputy Head of N. Müller Lab

Phone: +49 89 3187-4483
E-mail
Building/Room: 58a / 022

 

 

Curriculum Vitae

TimePosition
Since  2019Deputy Head of N. Mueller lab, Institute of Computational Biology, Helmholtz Center Munich, Germany
Since  2019Early Career Scientist, AeroHealth Helmholtz International Lab, Institute of Computational Biology, Helmholtz Center Munich, Germany
Since  2018Postdoctoral Fellow, Institute of Computational Biology, Helmholtz Center Munich, Germany
2013-2017PhD in Bioinformatics, University of Stockholm, Sweden
2009-2013MSc in Bioinformatics, University of Linz, Austria
2006-2010BSc in Biomedical Informatics, UMIT Hall in Tirol, Austria

 

 

 

Publications

Guala D*, Ogris C*, Müller N, Sonnhammer EL. Genome-wide functional association networks: background, data & state-of-the-art resources. Briefings in Bioinformatics. 2019 Jul.

Berglund E*, Maaskola J*, Schultz N*, Friedrich S*, Marklund M, Bergenstrahle J, Tarish F, Tanoglidi A, Vickovic S, Larsson L, Salmen F., Ogris C, Wallenborg K, Lagergren J, Stahl P, Sonnhammer EL, Helleday T, Lundeberg J, Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity. Nature communications. 2018 Jun 20;9(1):2419.

Ogris C*, Guala D*, Kaduk M*, Sonnhammer EL. FunCoup 4: new species, data, and visualization. Nucleic acids research. 2017 Nov 20;46(D1):D601-7.

Asim M, Tarish F, Zecchini HI, Sanjiv K, Gelali E, Massie CE, Baridi A, Warren AY, Zhao W, Ogris C, McDuffus LA. Synthetic lethality between androgen receptor signalling and the PARP pathway in prostate cancer. Nature Communications. 2017 Aug 29;8(1):374.

Ogris C, Helleday T, Sonnhammer EL. PathwAX: a web server for network crosstalk based pathway annotation. Nucleic acids research. 2016 May 5;44(W1):W105-9.

Ogris C, Guala D, Helleday T, Sonnhammer EL. A novel method for crosstalk analysis of biological networks: improving accuracy of pathway annotation. Nucleic acids research. 2016 Sep 22;45(2):e8-.

Lipp AM, Juhasz K, Paar C, Ogris C, Eckerstorfer P, Thuenauer R, Hesse J, Nimmervoll B, Stockinger H, Schütz GJ, Bodenhofer U. Lck mediates signal transmission from CD59 to the TCR/CD3 pathway in Jurkat T cells. PLoS One. 2014 Jan 15;9(1):e85934.

Schmitt T, Ogris C, Sonnhammer EL. FunCoup 3.0: database of genome-wide functional coupling networks. Nucleic acids research. 2013 Oct 31;42(D1):D380-8.


*Authors contributed equally